Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQFDVTIEIPKGQRNKYEVDHETGRVRLDRYLYTPMAYPTDYGFIEDTLGDDGDPLDALVLLPQPVFPGVLVAARPVGMFRMVDEHGGDDKVLCVPAGDPRWDHVQDIGDVPAFELDAIKHFFVHYKDLEPGKFVKAADWVDRAEAEAEVQRSVERFKAGTH
4Z71 Chain:A ((10-168))
MQFDVTIEIPKGQRNKYEVDHETGRVRLDRYLYTPMAYPTDYGFIEDTLGDDGDPLDALVLLPQPVFPGVLVAARPVGMFRMVDEHGGDDKVLCVPAGDPRWDHVQDIGDVPAFELDAIKHFFVHYKDLEPGKFVKAADWVDRAEAEAEVQRSVERFKA---
General information:
TITO was launched using:
RESULT:
Template:
4Z71.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48565 for 1200 contacts (-40.5/contact) +
2D Compatibility (PS) -17191 + (NN) -9375 + (LL) -76
1D Compatibility (HY) -22400 + (ID) 7950
Total energy: -105557.0 ( -87.96 by residue)
QMean score : 0.567
(partial model without unconserved sides chains):
PDB file :
Tito_4Z71.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4Z71-query.scw
PDB file :
Tito_Scwrl_4Z71.pdb
: