Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRALVTGAAGFIGSTLVDRLLADGHSVVGLDNFATGRATNLEHLADNSAHVFVEADIVTAD-LHAILEQHRPEVVFHLAAQIDVRRSVADPQFDAAVNVIGTVRLAEAARQTGVRKIVHTSSGGSIYGTPPE-YPTPETAPTDPASPYAAGKVAGEIYLNTFRHLYGLDCSHIAPANVYGPRQDPHGEAGVVAIFAQALLSGKPTRVF-----GDGTNTRDYVFVDDVVDAFVRVSADVGGGLRFNIGTGKETSDRQLHSAVAAAVGGPDDPEFHPPRLGDLKRSCLDIGLAERVLGWRPQIELADGVRRTVEYFRHKHTD |
| 2P5Y Chain:A ((1-308)) | MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENV-----PKGVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFSLEG--IYNVGTGEGHTTREVLMAVAEAAGKAPEVQPAPPRPGDLERSVLSP-LKLMAHGWRPKVGFQEGIRLTVDHFR----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2P5Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138399 for 2719 contacts (-50.9/contact) +
2D Compatibility (PS) -32450 + (NN) -13823 + (LL) 352
1D Compatibility (HY) -18800 + (ID) 7050
Total energy: -210170.0 ( -77.30 by residue)
QMean score : 0.503
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