Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTARLRPELAGLPVY-VPGKTVPGAIKLASNETVFGP----LPSVRAAIDRATDTVNRYPDNGCVQLKAALA----RHLGPDFAPEHVAVGCGSVSLCQQLVQVTASVGDEVVFGWRSFELYPPQVRVAGAIPIQVPL-TDHTFDLYAMLATVTDRT-RLIFVCNPNNPTSTVVGPDALARFVEAVPAHILIAIDEAYVEYIRDGMRPDSLGLVRAH-NNVVVLRTFSKAYGLAGLRIGYAIGHPDVITALDKVYVPFTVSSIGQAAAIASLDAADELLARTDTVVAERARVSAELRAAGFTLPPSQANFVWLPLGSRTQDFVEQAA------DARIVVRPYGTDG-VRVTVAAPEENDAFLRFARRWRSDQ |
| 3CQ5 Chain:A ((14-358)) | ----LREELRGEHAYGAPQLNVD--IRLNTNENPYPPSEALVADLVATVDKIATELNRYPERDAVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINVAPG--IVIVDEAYAEF---SPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAVMLVRLPYHLSALSQAAAIVALRHSADTLGTVEKLSVERVRVAARLEELGYAVVPSESNFVFF------GDFSDQHAAWQAFLDRGVLIRDVGIAGHLRTTIGVPEENDAFL---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CQ5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -226448 for 2668 contacts (-84.9/contact) +
2D Compatibility (PS) -35870 + (NN) -16809 + (LL) 1788
1D Compatibility (HY) -19600 + (ID) 5550
Total energy: -302489.0 ( -113.38 by residue)
QMean score : 0.535
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