Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAYDVARVRGLHPSL-----GDGWVHFDAPAGMLIPDSVATTVSTAFRRSGASTV--GAHPSARRSAAVLDAAREAVADLVNADPGG---VVLGADRAVLLSLLAEA-SSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLISKSTRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLDIRETDADVVTVNAHAWGGPP-IGAMVFRDP------------SVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQIPVVSFAVHKVPADRVVQRLADNGILAIANTGSRVLDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALASLG |
| 1C0N Chain:A ((3-398)) | --FSVDAVRADFPVLSREVNGLPLAYLDSAASAQKPSQV-IDAEAEFYRHGYAAVHAGAHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGI--NLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPD-GTLQLETLPTLFDAATRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSAL--------------GLNNIAEYEQNLMHYALSQLESVPDLTLYG-PQARLGVIAFNLGAHHAYDVGSFLDNYGI-AVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1C0N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -266506 for 3157 contacts (-84.4/contact) +
2D Compatibility (PS) -41296 + (NN) -23655 + (LL) 2256
1D Compatibility (HY) -23200 + (ID) 5200
Total energy: -357601.0 ( -113.27 by residue)
QMean score : 0.501
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