Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEMKTDAATLAQEAGNFERISGDLKTQIDQVESTAGSLQGQWRGAAGTAAQAAVVRFQEAANKQKQELDEISTNIRQAGVQYSRADEEQQQALSSQMGF
4J11 Chain:A ((1-85))
MAEIKITPEELERIAGNFKNAAGEAQSQINRLEGDINSLEGQWAGATQAKFRGEFIQSKQAMQQYIPILEGISTDLKRIADKFRN---------------
General information:
TITO was launched using:
RESULT:
Template:
4J11.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9553 for 468 contacts (20.4/contact) +
2D Compatibility (PS) -9103 + (NN) -1397 + (LL) 1188
1D Compatibility (HY) -4000 + (ID) 1250
Total energy: -5009.0 ( -10.70 by residue)
QMean score : 0.496
(partial model without unconserved sides chains):
PDB file :
Tito_4J11.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4J11-query.scw
PDB file :
Tito_Scwrl_4J11.pdb
: