Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRSL--LILDRDGVINLDSDDYIKTLDEWIPIPSSIEAIARLSQAGWTVAVATNQSGIARGYYDLAVLEAMHARLRELVAEQGGEVGLIVYCPHGPDDG-------CDCRKPKPGMLRQIGEHYGVDLSGIWFVGDSIGDLEAARAVDC-QPVLVKTGKGVRTLGKPLPEGTLIFDDLAAVASALLQ
3ESQ Chain:A ((24-181))
---SVPAIFLDRDGTINVDHG-YVHEIDNFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQAIKK--
General information:
TITO was launched using:
RESULT:
Template:
3ESQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92092 for 1162 contacts (-79.3/contact) +
2D Compatibility (PS) -17400 + (NN) -17330 + (LL) 356
1D Compatibility (HY) -14000 + (ID) 2950
Total energy: -143416.0 ( -123.42 by residue)
QMean score : 0.609
(partial model without unconserved sides chains):
PDB file :
Tito_3ESQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ESQ-query.scw
PDB file :
Tito_Scwrl_3ESQ.pdb
: