Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYVDGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYARGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALT-RTTQEVRLGDRLFPTEERAVNSTFMPGEPSRE-VKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKLSYALVLMASRPLSVTDRVQNP |
1LAG Chain:E ((68-122)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ISSLSITDKRQQEIAFSDKLYAADSRLIAAKGSPIQPTLESLKGKHVGVLQGSTQEAYANDNWRTKGVDVVAYANQDLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKEYAFAGPSVKDKKYFGDGTGVGLRKDD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LAG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 60 for 202 contacts (0.3/contact) +
2D Compatibility (PS) -5481 + (NN) -1556 + (LL) 11584
1D Compatibility (HY) -2800 + (ID) 800
Total energy: 1007.0 ( 4.99 by residue)
QMean score : 0.413
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