Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISSFRAQCAARVVREGGVIAYPTEAVWGLGCDPWNEDAVYRLLALKARPVEKGLIVVAANIHQLDFLLEDLPDVWLDRLAGTWPGPNTWLVPHQERLPEWVTGVHDSVAVRVTDHPLVQELCHLTG-PLISTSANPAGRPAARTRLRVEQYFHDELDAILGGALGGRRNPSLIRDLVTGQVIRPA
4E1B Chain:A ((16-173))
-----KIKIAADVIRNGGTVAFPTETVYGLGANAFDGNACLKIFQAKNRPVDNPLIVHIADFNQLFEVAKDIPDKVLEIAQIVWPGPLTFVLKKTERVPKEVTAGLDTVAVRMPAHPIALQLIRESGVPIAAPSANLATRPSPTKAEDVIVDLNGRVDVIIDGGHTFFGVESTIINVTVEPVLLRP
General information:
TITO was launched using:
RESULT:
Template:
4E1B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -125194 for 1316 contacts (-95.1/contact) +
2D Compatibility (PS) -17642 + (NN) -15449 + (LL) 488
1D Compatibility (HY) -10400 + (ID) 2950
Total energy: -171147.0 ( -130.05 by residue)
QMean score : 0.471
(partial model without unconserved sides chains):
PDB file :
Tito_4E1B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4E1B-query.scw
PDB file :
Tito_Scwrl_4E1B.pdb
: