Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNHCFANGNKRTAAAAATVFLLLNGIELTGPAQDFVDIMVALVTREASVQDLEDWMFYWHRPFDAYNLPDSDAFERMVARLGIG
3KH2 Chain:A ((66-118))
--HISNDANKRTALNSALLFLRRNGVQVF-DSPELADLTVGAATGEISVSSVADTLRRLYGS----------------------
General information:
TITO was launched using:
RESULT:
Template:
3KH2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21247 for 277 contacts (-76.7/contact) +
2D Compatibility (PS) -5902 + (NN) -3251 + (LL) 1288
1D Compatibility (HY) -1600 + (ID) 900
Total energy: -31612.0 ( -114.12 by residue)
QMean score : 0.397
(partial model without unconserved sides chains):
PDB file :
Tito_3KH2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KH2-query.scw
PDB file :
Tito_Scwrl_3KH2.pdb
: