Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRDAALRYPNILFDLDGTLTDPREGITRSVQFALARLGIDEPDLARLEHFIGPPLLQCFMQTYGF--DEARAWEAVNHYRERF--RVTGLYENRVFDGIPELLEALVGRGHTLYVATSKPGVFAREIARHFAFDRHFKAIYGSELDGTRTHKEELIRHLLDSEGLAAEHCLMIGDRMHDLLGASRNGVACIGVGYGFGSEDEL-RAHQPTHYCADLAALRQVLESH
4EX6 Chain:A ((21-235))
---------GVILDLDGTLADTPAAIATITAEVLAAMGTAVSRGAILST-VGRPLPASLAGLLGVPVEDPRVAEATEEYGRRFGAHVRAAGPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDSVERGKPHPDMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVTAVLDG-
General information:
TITO was launched using:
RESULT:
Template:
4EX6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -137863 for 1874 contacts (-73.6/contact) +
2D Compatibility (PS) -23552 + (NN) -17015 + (LL) 924
1D Compatibility (HY) -8800 + (ID) 3250
Total energy: -189556.0 ( -101.15 by residue)
QMean score : 0.465
(partial model without unconserved sides chains):
PDB file :
Tito_4EX6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EX6-query.scw
PDB file :
Tito_Scwrl_4EX6.pdb
: