Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAELSTENLAQGQTTTEQTSEFASLLLQEFKPKTERAREAVETAVRTLAEHALEQTSLISNDAIKSIESIIAALDAKLTAQVNLIMHHADFQQLESAWRGLHYLVNNTETDEQLKIRVLNISKPELHKTLKKFKGTTWDQSPIFKKLYEEEYGQFGGEPYGCLVGDYYFDQSPPDVELLGEMAKISAAMHAPFISAASPTVMGMGSWQELSNPRDLTKIFTTPEYAGWRSLRESEDSRYIGLTMPRFLARLPYGAKTDPVEEFAFEEETDGADSSKYAWANSAYAMAVNINRSFKLYGWCSRIRGVESGGEVQGLPAHTFPTDDGGVDMKCPTEIAISD-RREAELAKNGFMPLLHKKNTDFAAFIGAQSLQKPAEYDDPDATANANLAARLPYLFATCRFAHYLKC----IVRDKIGS---FKEKDEMQRWLQDWILNYVDGDPAHSTETTKAQHPLAAAEVVVEEVEG-----NPGYYNSKFFLRPHYQLEGLTVSLRLVSKLPSAKEA |
| 3J9Q Chain:A ((195-378)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ARNAPASAYAAGLFAWTDAEYGFWSSPSNKEIKG-VTGTS-------------RPVEFLDGDETCRANLLNNANIATIIR--D-DGYRLWGNRTLSSDSKW---------------AF-VTRVRTMDLVMDAILAGHKWAVDRGITKTYVKDVTEGLRAFMRDLKNQGA------V------INFEVYADPDLNSASQLAQGKVYWNIRFTDVPPAENPNFRVEVTDQWLTEVLD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J9Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30003 for 1014 contacts (-29.6/contact) +
2D Compatibility (PS) -18297 + (NN) -5215 + (LL) 21320
1D Compatibility (HY) -1600 + (ID) 1000
Total energy: -34795.0 ( -34.31 by residue)
QMean score : 0.205
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