Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLDWTCKHHADLTLKELYALLQLRTEVFVVEQKCPYQ---EVDGLDLVGDT-HHLMAWRDGQLLAYLRLLDPV-------------------RHEGQVVIGRVVSSSAARGQG----LGHQLMERALQAAERLWLDTPVYLSAQAHLQAYYGRYGFVA--VTEVYLEDDIPHIGMRRA
1RO5 Chain:A ((2-177))
SHMIVQIGRREEFDKKLLGEMHKLRAQVFKERKGWDVSVIDEMEIDGYDALSPYYMLIQEDGQVFGCWRILDTTGPYMLKNTFPELLHGKEAPCSPHIWELSRFAINSGQKGSLGFSDCTLEAMRALARYSLQNDI-QTLVTVTTVGVEKMMIRAGLDVSRFGPHLKIGIERAVALRIE
General information:
TITO was launched using:
RESULT:
Template:
1RO5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85209 for 1007 contacts (-84.6/contact) +
2D Compatibility (PS) -15717 + (NN) -4577 + (LL) -76
1D Compatibility (HY) -6000 + (ID) 1000
Total energy: -112579.0 ( -111.80 by residue)
QMean score : 0.346
(partial model without unconserved sides chains):
PDB file :
Tito_1RO5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RO5-query.scw
PDB file :
Tito_Scwrl_1RO5.pdb
: