Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLKWTRKAAADLDAIYDHYVVLIGPEKALKAVQDIVEQVKPLQQVANQGAGRPS----E--VPGVRTLTLERWPFSAPFRVKGKEIQILRIDRVEITP
3OEI Chain:C ((13-94))
RSVNFDPDAWEDFLFWLA-A--------DRKTARRITRLIGEIQRD--PFSGIGKPEPLQGELSGYWSRRIDD-EHRLVYRAGDDEVTMLKARYHY---
General information:
TITO was launched using:
RESULT:
Template:
3OEI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33424 for 509 contacts (-65.7/contact) +
2D Compatibility (PS) -8375 + (NN) -3013 + (LL) 1384
1D Compatibility (HY) -2000 + (ID) 550
Total energy: -45978.0 ( -90.33 by residue)
QMean score : 0.502
(partial model without unconserved sides chains):
PDB file :
Tito_3OEI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OEI-query.scw
PDB file :
Tito_Scwrl_3OEI.pdb
: