Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRTWIRNPLAIFTANGLDAAGGLVVEDGRIV----ELLGAGQQPAQPCASQ-FDASRHVVLPGLVNTHHHFYQTLTRAWAPVVNQPLFPWLK---TLYPVWAR---LTPEKLELATKVALAELLLSGCTTAADHHYLFPGGL-EQAIDVQAGVVEELGMRAMLTRGSMSLGEKDGGLPPQQTVQEAETILADSERLIARYHQRGDGARVQIALAPCSPFSVTPEIMRASAEVAARHDVRLHTHLAETLDEEDFCLQRFGLRTVDYLDSVGWLGPRTWLAHGIHFNAEEIRRLGEAGTGICHCPSSNMRLASGICPTVELEAAGAPIGLGVDGSASNDASNMILEARQALYLQRLRYGAERITPELALG------WATRGSARLLGRSDIGELAPGKQADLALFKLDELRFSGSHDPLSALLLCA-ADRADRVMVGGAWRVVDGAVEGLDLAALIARHRAAASALIAG |
| 4L9X Chain:A ((33-440)) | -------------------------LEDADILIDGPKIVAVGKNLSDRSVSRTIDGRGMIALPGLINSHQHLYEGAMRAIPQLERVTMASWLEGVLTRSAGWWRDGKFGPDVIREVARAVLLESLLGGITTVADQHPFFPGATADSYIDATIEAATDLGIRFHAVRSSMTLGKSEGGFCDDLFVEPVDRVVQHCLGLIDQYHEPEPFGMVRIALGPCGVPYDKPELFEAFAQMAADYDVRLHTHFYEPLD-AGMSDHLYGMTPWRFLEKHGWASDRVWLAHAVVPPREEIPEFADAGVAIAHLIAPDLRMGWGLAPIREYLDAGITVGFGTTGSASNDGGNLLGDLRLAALAHR---PADPNEPEKWLSARELLRMATRGSAECLGRPDLGVLEEGRAADIACWRLDGVDRVGVHDPAIGLIMTGLSDRASLVVVNGQVLVENERPVLADLERIVANTTALIPK---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L9X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192296 for 3430 contacts (-56.1/contact) +
2D Compatibility (PS) -42086 + (NN) -22119 + (LL) 2648
1D Compatibility (HY) -20800 + (ID) 7050
Total energy: -281703.0 ( -82.13 by residue)
QMean score : 0.499
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