Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKHRRTQSRMSVLRRLAAVLGLGACALAAEAAEPLKIGFVYVGPVGDHGWTYQHELGRRELVEHFGDKVKTSFVENVAEGADAERV--IRNLAKDGYGLVFTTSFGYMNPTAKVARQFPKVTFEHATGYKRDR-NLGTYLSRSYEGRYVGGF---LAAKMTRSHKIGYIASFPIPEVIRDINAIQLALDKYDPQAELKVMWVSTWFDPGKEADAANALIDQGVDVVFQ---HTDSPAPIQAAERR----GVYAVGYASDMQHFG-----PKTVLTSIVNDWGPHYIRSAQAVMDGTW-KSEDFWGGLAESTVVLPLNQEVLPAPVREEAGRLIESIRSGAFHPFTGPIRDQSGKERFAAGVSATKADLASMNYYVEGIKADLPK |
| 2FQW Chain:A ((43-304)) | ----------------------------------------------------------------------------VTASTDAEYVPSLSAFADENMGLVVACGSFLVEAVIETSARFPKQKFLVIDAVVQDRDNVVSAVFGQNEGSFLVGVAAALKAKEAGKSAVGFIVGMELGMMPLFEAGFEAGVKAVDPDIQVVVEVANTFSDPQKGQALAAKLYDSGVNVIFQVAGGTGNGVIKEARDRRLNGQDVWVIGVDRDQYMDGVYDGSKSVVLTSMVKRADVAAERISKMAYDGSFPGGQSIMFGLEDKAVGIPEENPNLSSAVMEKIRSFEEKIVSKEIVVPVRSARMMN-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FQW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85911 for 1986 contacts (-43.3/contact) +
2D Compatibility (PS) -26334 + (NN) -7442 + (LL) 7016
1D Compatibility (HY) -13600 + (ID) 3250
Total energy: -129521.0 ( -65.22 by residue)
QMean score : 0.467
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