Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTRPDSDAAPYEPVLEQTAQAWLVRLRGTPDAATRRAFEDWLAQRPAHAEAYARAEALWRLTEIPASRLAIEEADALEAYLRPRRASRNPRRWAYPLASVACLLAMLWLGGWWQPGDWLQDWRADYVAAPGQVAEWKLADGSYLSLDAGSAVRVRIDGGQRRVELLRGAAALRVKRDALPFVVEAGEGRARVLGTEFEVRRGAGATRVTVLQGRVAVSAGTGAGAAEEVLGAGQQVGFADGKLGRPVAIDA----AAALAWRQGWLSFYRRPLAEVLDELARYYPGRILLLDDALGRQPVSGSFRSDDPEAALKSLQAVLGYRQQILFGRLVVIR |
4MIO Chain:A ((222-298)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVIQVLVHVTAQYGYEVKLEVIGETGELQLPNYGLGPILRSNANQQTAVEMSWINRFIQAYNTEVQEFIDEVAKSEPPVGPSAWDGYIAAITAAAANRSQKDQETVLINVAGTPTFYQ--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MIO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3409 for 278 contacts (-12.3/contact) +
2D Compatibility (PS) -7583 + (NN) 558 + (LL) 16884
1D Compatibility (HY) -6000 + (ID) 1050
Total energy: -600.0 ( -2.16 by residue)
QMean score : -0.262
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