Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVVRRYPLALLLGMAGALADELPDGSLLQRYGVQADQLPTLAADPPSRKEEKETPSRFRVEPEQPLVTFGVKDHKGMEPTGNPSIDAMHERDRRICRNIRRQALEKGKAQPFDGYIECP
1F1V Chain:A ((247-305))
------------------------------RHGV-SNAFYLYILDPDGHRIEIYTQDYYTGDPDNPTITWDVHDNQRRDWWGNPVVPSWYTEASLVLDLDGNPQPVIV------------
General information:
TITO was launched using:
RESULT:
Template:
1F1V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 13964 for 266 contacts (52.5/contact) +
2D Compatibility (PS) -6143 + (NN) -3850 + (LL) 3520
1D Compatibility (HY) -2000 + (ID) 750
Total energy: 4741.0 ( 17.82 by residue)
QMean score : 0.231
(partial model without unconserved sides chains):
PDB file :
Tito_1F1V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1F1V-query.scw
PDB file :
Tito_Scwrl_1F1V.pdb
: