Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDCLFCKIVAGEVPARKFYEDEEVVAFHDIGPQAPVHFLVIPKRHIPTLEHLTEADRPLAGHILFTAQRLAREQGCEEGFRVVMNCNDLGGQTVHHIHMHVLGQRQMHWPPG
1RZY Chain:A ((16-126))
-DTIFGKIIRKEIPAKIIFEDDQCLAFHDISPQAPTHFLVIPKKHISQISAAEDADESLLGHLMIVGKKCAADLGLKKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMNWPPG
General information:
TITO was launched using:
RESULT:
Template:
1RZY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93652 for 774 contacts (-121.0/contact) +
2D Compatibility (PS) -12341 + (NN) -9472 + (LL) 208
1D Compatibility (HY) -11200 + (ID) 2750
Total energy: -129207.0 ( -166.93 by residue)
QMean score : 0.648
(partial model without unconserved sides chains):
PDB file :
Tito_1RZY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RZY-query.scw
PDB file :
Tito_Scwrl_1RZY.pdb
: