Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDNDDRIKLEASWKEALREEFDKPYMKQLGEFLRQEKAAGKVIFPPGPLIFNALNTTPLENVKVVIIGQDPYHGPGQAHGLCFSVQPGVPTPPSLQNIYKELNRDLNIPIPNNGYLQRWAEQGVLLLNTSLTVEQAKAGSHANAGWQPFTDRVIEVVNERCERLVFLLWGSHAQSKQKLIDPQRHLILKSAHPSPLSAYRGFLGNGHFSRTNKFLEQNGKTPIDWSLPDL
3ZOR Chain:A ((5-225))
---------LQDSWWNQLKEEFEKPYYQELREMLKREYAE-QTIYPDSRDIFNALHYTSYDDVKVVILGQDPYHGPGQAQGLSFSVKPGVKQPPSLKNIFLELQQDIGCSIPNHGSLVSWAKQGVLLLNTVLTVRRGQANSHKGKGWERLTDRIIDVLSERERPVIFILWGRHAQMKKERIDTSKHFIIESTHPSPFSARNGFFGSRPFSRANAYLEKMGEAPIDWCIKDL
General information:
TITO was launched using:
RESULT:
Template:
3ZOR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98000 for 1810 contacts (-54.1/contact) +
2D Compatibility (PS) -24038 + (NN) -14308 + (LL) 148
1D Compatibility (HY) -23600 + (ID) 6050
Total energy: -165848.0 ( -91.63 by residue)
QMean score : 0.575
(partial model without unconserved sides chains):
PDB file :
Tito_3ZOR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZOR-query.scw
PDB file :
Tito_Scwrl_3ZOR.pdb
: