Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSGPTDTSTQPQGFSMTRLRLIGSAVLLSLSSMAMADSASQAEQFLKLVHADK-LTVPVYAQVQQMLAQRFAQAKAPESKKAVLERYQAKANAELDRAIGWDKIKPELIKLYTTNFTESELKDLNAFYQSPLGKKVLEKMPRLTAESAQLTQAKLQGAVEPVNKLMADMDKELGVAAPAQKKK |
2WUD Chain:A ((158-226)) | -----------------------------LSKFSVAPTRENLEAFLRVMVYDKNLITP------ELVDQRFALASTPESLTATRAMGKSFAGADFEAGMMWREVYRLRQPVLLIWGREDRVNPLDGALVALKTIPRAQLHVFGQCGHWVQVEKFDEFNKLTIEFLG----------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2WUD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 1887 for 362 contacts (5.2/contact) +
2D Compatibility (PS) -7344 + (NN) -3984 + (LL) 3592
1D Compatibility (HY) -4400 + (ID) 1100
Total energy: -11349.0 ( -31.35 by residue)
QMean score : 0.461
|
|
|