Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQFEHLVQVNDRTLVDLPVLDRLQLWEGLVCRAREPQYFVV-GLERFEILVDDG--DRLHRRLYL-P-G--LVVEDEVVL-KAPD-SAHYSIKPSAE---VAGGSLDMTIEEPEP-GSLFVRFAYCTRYLQP-LGDELPYDAFVKQAYIAMDVETIATIRDRFGASAASGS
2I9Y Chain:A ((25-162))
-KLETDVEIKASA---------DKFHHMFAGKPHHVSKASPGNIQGCDLHEGDWGTVGSIVFWNYVHDGEAKVAKERIEAVEPDKNLITFRVIEGDLMKEYKSFLLTIQVTPKPGGPGSIVHWHLEYEKISEEVAHPETLLQFCVEVSKEIDEHLLAEE------------
General information:
TITO was launched using:
RESULT:
Template:
2I9Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35115 for 697 contacts (-50.4/contact) +
2D Compatibility (PS) -13216 + (NN) -1638 + (LL) 2460
1D Compatibility (HY) -2000 + (ID) 400
Total energy: -49909.0 ( -71.61 by residue)
QMean score : 0.247
(partial model without unconserved sides chains):
PDB file :
Tito_2I9Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2I9Y-query.scw
PDB file :
Tito_Scwrl_2I9Y.pdb
: