Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSIKKNLGLLAMTAALAACASNPNDLPDFPEHEYAATQQVGEGVINGDLYLTSASGAIQKGTNTKVALEPATSYMKAYYAKFGNLDAAKRDP-DVQPPV-------LD-PRRATYVREATTDQNGRFDFDHIPNGTYYISSELTWSAQSDGKTITEGGTVTKLVTVSGSQPQKVLLTR |
| 4M1J Chain:C ((372-436)) | --------------------------------------------------------------------------YFQRFMQRFAELDGAWKEPFDAQRPLDTPQGIALDRPQVATQVRQALADAAAEVEKSGIPDGARWGDLQVSTRGQERIAIPGGDGHFGVYNAIQSVRKGDHLEVV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M1J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -738 for 253 contacts (-2.9/contact) +
2D Compatibility (PS) -5931 + (NN) -3281 + (LL) 4316
1D Compatibility (HY) -3200 + (ID) 1050
Total energy: -9884.0 ( -39.07 by residue)
QMean score : 0.405
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