Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQIFNPNPGNTLDTVANALKEQANAANKDVNDAIKALQGTDNADNPALLAELQHKINKWSVIYNINSTVTRALRDLMQGILQKI
3J0R Chain:A ((6-80))
------PNDDWTLSSLSETFDDGTQTLQGELTLALDKL--AKNPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNF
General information:
TITO was launched using:
RESULT:
Template:
3J0R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3220 for 456 contacts (7.1/contact) +
2D Compatibility (PS) -8084 + (NN) -3299 + (LL) 676
1D Compatibility (HY) -5200 + (ID) 1000
Total energy: -13687.0 ( -30.02 by residue)
QMean score : 0.457
(partial model without unconserved sides chains):
PDB file :
Tito_3J0R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J0R-query.scw
PDB file :
Tito_Scwrl_3J0R.pdb
: