Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKLHTNHGVITLKLDEEKAPETAANFKEYVKSGHYDNTVFHRVINNFMIQGGGFEPGMKQKPTRAPIKNEANNGLTNKVGSIAMARTMDPHSASAQFFINVADNDFLNHTAPTTQGWGYAVFGEVVEGMDVVNKIKGVATTMRSGHQDVPAEDVIIEKAEIVEE
2RS4 Chain:A ((1-164))
MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPGMKQKATKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDVVDKIKGVATGRSGMHQDVPKEDVIIESVTVSE-
General information:
TITO was launched using:
RESULT:
Template:
2RS4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61275 for 1261 contacts (-48.6/contact) +
2D Compatibility (PS) -17257 + (NN) -7439 + (LL) 104
1D Compatibility (HY) -15200 + (ID) 5500
Total energy: -106567.0 ( -84.51 by residue)
QMean score : 0.547
(partial model without unconserved sides chains):
PDB file :
Tito_2RS4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RS4-query.scw
PDB file :
Tito_Scwrl_2RS4.pdb
: