Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKNARYAWRLSLGGLLLGLLACAVYLLAVPLGFKYGEIQVGHGLEHEGRIAWDAAGVPHIRAQSLEDGYFLLGYSHARDRLWQMEFARRYAGGTLSEVFGAKTLPMDRFARTLGFRRTAEGIYANLDAPTRVLLQRYSDGINAYLELAPAALPLEFSLVRHERPGPWGPVDSLSLHLLYSWTLSANLGMQLQRLALAEHLDLARINEVFAPYPGERPPATRDYASLYRSLHGTPDAGKLLGQLPGSNVEGIGSNNWVVSASRSATGKPLLANDPHLRLTNPAAFYLASLKIPGLSLTGANFAGAPLFVIGHNQRIAWGYTNTGSHIQDAYLERVDPQDPRRYLTPDGYRPFETRLERIAVRDGETVSLEVRSTRHGPVISDIYEPARLPQAQRDRLVIALAWTGLDRHDKTFPSLLAINRAEGWEQFLDAAANFGVPPQNMVYADVEGNIGYVSAGRVPLRGADDDLHGLAPSPGWESRYDWVGYVPESAKPRSLNPREGFIATANQRIVPPDNAFDFGHDWVLPYRYDRIREWLGGPGQRTLEDSLEL----QNDEFSSVMASLLPKMLEQVSD---PELRASEAFALLQGWN---HQAAADLAAP--LIAGYWVRAFTRELLQPRIGTQLLASGWNQRNYDGFLRLILDGQADLRFWCGQEQGCDLKLNQSLRRALDELRAAHGSAPSGWKWGEAHAALAEHVPFHKTPLRALFDLKNNKGGDNFSVNVGRFDYSDPANPFNTRIAATLRMVIDLADFDNSRYALSTRNSGLPFDGATDLNELWARGAYIRIADDAPDATDRQLVLRPSASSSGEPRP |
| 3K3W Chain:B ((1-359)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNLWSTRPERVQEGSTVLINGPQFGWYNPAYTYGIGLHGAGFDVVGNTPFAYPIVLFGTNSEIAWGATAGPQDVVDIYQEKLNPSRADQYWFNNAWRTMEQRKERIQVRGQADREMTIWRTVHGPVMQFDYDQGAAYSKKR-------SWDGYEV--QSLLAWLNVAKARNWTEFLDQASKMAISI-NWYYADKHGNIGYVSPAFLPQRPADQDIR--VPAKG-DGSMEWLGIKSFDAIPKAYNPPQGYLVNWNNKPAPDKTNTD-TYYWTYG---DRMNELVSQYQQKDLFSVQEIWEFNQKASYSDVNWRYFRPHLEKLAQQLPADDSSKAALTMLLAWDGMEQDQGGQNAGPARVLFKTWLEEMYKQVLMPVVPESHRAMYSQTGFATQQGPNPGSINLSMGTKVLLRALVLEAHPDPKRVNVFGERSSQEIMHTALQNAQARLSQEQGAQMARWTMPTSVHRFSDKNFTGTPQTMPGNTFAFTGYQNRGTENNRVVFDAKGVEFCDAMPPGQSGFTDRNGVRSPHYEDQLKLYENFECKTMDVTHADIRRNAQSSTMLLIQPQP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K3W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43740 for 2369 contacts (-18.5/contact) +
2D Compatibility (PS) -36843 + (NN) -17012 + (LL) 17460
1D Compatibility (HY) -22000 + (ID) 5000
Total energy: -107135.0 ( -45.22 by residue)
QMean score : 0.220
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