Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGIPEITAYPLPTAQQLPANLARWSLEPRRAVLLVHDMQRYFLRPLPES--LRAGLVANAARLRRWCVEQGVQIAYTAQPGSMTEEQRGLLKDFWGPGMRASPADREVVEELAPGPDDWLLTKWRYSAFFHSDLLQRMRAAGRDQLVLCGVYAHVGVLISTVDAYSNDIQPFLVADAIADFSEAHHRMALEYAASRCAMVVTTDEVLE
2FQ1 Chain:A ((7-209))
-----KLQAYALPESHDIPQNKVDWAFEPQRAALLIHDMQDYFVSFWGENCPMMEQVIANIAALRDYCKQHNIPVYYTAQPKEQSDEDRALLNDMWGPGLTRSPEQQKVVDRLTPDADDTVLVKWRYSAFHRSPLEQMLKESGRNQLIITGVYAHIGCMTTATDAFMRDIKPFMVADALADFSRDEHLMSLKYVAGRSGRVVMTEELLP
General information:
TITO was launched using:
RESULT:
Template:
2FQ1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -165674 for 1644 contacts (-100.8/contact) +
2D Compatibility (PS) -21750 + (NN) -14425 + (LL) 72
1D Compatibility (HY) -19200 + (ID) 4700
Total energy: -225677.0 ( -137.27 by residue)
QMean score : 0.709
(partial model without unconserved sides chains):
PDB file :
Tito_2FQ1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FQ1-query.scw
PDB file :
Tito_Scwrl_2FQ1.pdb
: