Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLHIDSSILGDASASRQLSAELVQAWRQNEDGLDVTYRDLAADAVAHFSALTLAAGSTPAELRDAALKHE-VAVGEEVLEEFLAADVVVIGAPMYNFTISSQLKAWIDRIAVAGKTFRYTENGPVGLAGDKKVVIVSTAGGVHAGQPTGAAHEGYLRTVLGFFGITDIEVVRAEGLAYGEEPRTQAIAAARRQIAGQFAAA
2Z98 Chain:A ((2-194))
-KVLVLKSSILAGYSQSNQLSDYFVEQWREKHSADEITVRDLAANPIPVLDG-ELVGAL------LTPRQQEALALSDELIAELKAHDVIVIAAPMYNFNISTQLKNYFDLVARAGVTFRYTENGPEGLVTGKKAIVITSRGGIHKDGPTDLVTP-YLSTFLGFIGITDVKFVFAEGIAYGPEMAAKAQSDAKAAIDSIVSA-
General information:
TITO was launched using:
RESULT:
Template:
2Z98.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109007 for 1423 contacts (-76.6/contact) +
2D Compatibility (PS) -21125 + (NN) -11596 + (LL) 792
1D Compatibility (HY) -18000 + (ID) 4200
Total energy: -163136.0 ( -114.64 by residue)
QMean score : 0.516
(partial model without unconserved sides chains):
PDB file :
Tito_2Z98.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z98-query.scw
PDB file :
Tito_Scwrl_2Z98.pdb
: