Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRDRLYTWAGLWRSPSSSWEALRLEDDQAESQLRAPDERSGLPYQLDYRLRWDADWHLREAVFHVESETGVRKLHLLADGRGHWQDGDGEALPAFDGCLDIDIWPSPFTNTFPIRRLGLADGQRAEIRALYIEAPALEPR-SMRQAYTRLDASHYL--YENLEGSAFKAVLLVDEQGLVIDYPGLFQRL |
| 4D25 Chain:A ((249-327)) | ----------------------------------------------------------------------------------------------------DIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQLIEENDGKRILVFVETKRNADFIAAMLSEQQLLTSSIHGDRMQR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4D25.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -920 for 300 contacts (-3.1/contact) +
2D Compatibility (PS) -8043 + (NN) -3426 + (LL) 5836
1D Compatibility (HY) -6400 + (ID) 1000
Total energy: -13953.0 ( -46.51 by residue)
QMean score : -0.076
|
|
|