Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFLLIGLIRFYQYAISPLIGPRCRFYPSCSHYTLEAIRVHGALRGGYLGARRLLRCHPWHPGGYDPVPERQEQACACHRTAKPGK
1AS5 Chain:A ((8-19))
---------------------GKCRRY-GCSSASCCQR------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1AS5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -889 for 27 contacts (-32.9/contact) +
2D Compatibility (PS) -1146 + (NN) -1319 + (LL) 4512
1D Compatibility (HY) -400 + (ID) 250
Total energy: 508.0 ( 18.81 by residue)
QMean score : 0.214
(partial model without unconserved sides chains):
PDB file :
Tito_1AS5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AS5-query.scw
PDB file :
Tito_Scwrl_1AS5.pdb
: