Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNMPSILSLAVAGLLVAPVHAATAPSEPFQPPAESSLPDNAFGEMVRQGQALFVETRKNAPHLVGNQLNCVNCHLDQ----GRRANSAPQWAAYPVYPAFRAKNNKVNTFAERLQGCFQFSMNGKVPAADSPEIKALTVYAYWLASQAPTGVSLPGRGYPDVA---PPEGGYSIERGAKVYAAQCAICHGADGQGQM-ALGQTVFPPLWGAQSFNWGAGMHRINTAASFIKYNMPLGKPGTLSDRDAWDVAAFMNSHERP--QDPRLVDGSVEKTRQKFHANDGVNLYGQKVNGVLLGQGI |
| 4WQB Chain:A ((5-237)) | -------------------------TVALTVPAAALLPDGALGESIVRGRRYLSDTPAQLPDFVGNGLACRHCHPGRDGEVGTEANAAPFVGVVGRFPQYSARHGRLITLEQRIGD-FERSLNGRALALDHPALIDMLAYMSWLSQGVPVGAVVAGHGIPTLTLEREPDGVH----GEALYQARCLACHGADGSGTLDADGRYLFPPLWGPRSFNTGAGMNRQATAAGFIKHKMPLG---SLSDEEAWDVAGFVLTHPRPLF--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WQB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53219 for 1726 contacts (-30.8/contact) +
2D Compatibility (PS) -23141 + (NN) -11096 + (LL) 3928
1D Compatibility (HY) -12800 + (ID) 4650
Total energy: -100978.0 ( -58.50 by residue)
QMean score : 0.488
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