Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRDYATTAAGFDLQRTAAATLSGTLQALNACVECCDRHALPG--RIALFWEGKDGSRASY-TFSELKALSGRFANFLQAQGVRPGDCVAGLLPRTPELLVTILGAWRLGAVYQPLFTAFGPKAIEHRVATAGSKVLVTDAA----------NRDKLDELADPPLA----VTVGGPKGQGI--RRGDFSFWAEL-ERYPAEFEPVPRSGEDPFLMMFTSGTTGLAKPVPVPLKAILAFVGY-LREAVDLRPEDAFWNLADPGWAYGLYYAVAGPLAMGHPTTFYEGPFSVES---TCRIIRDYGITNLAGSPTAYRLLMAAG-AAAETALKGRLRAVSSAGEPLTPEVIRWFADRLGTT---IHDHYGQTELGMVLCNHHALAHPVRVGAAGFACPGHRVVVLDDD-------------LNELPPGQPGILALDRRRSPLMWFPGYQGLETAAFVGDYYLSGDTVELNEDGSISFVGRADDVITTSGYRVGPFDVESALIEHPAVMEAAVIGKPDPERTELVKAFVVLCAGHRPTPELADALQRYVRQRLSAHAYPREIEFLEELPKTPSGKIQRFLLRNQEIARQREAAPRAAAAN |
2P2Q Chain:A ((75-625)) | ---------------------------LNLAANCLDRHLQENGDRTAIIWEGDDTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGRIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDWQEGRDLWWRDLIEKASPEHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTETGGFMITPLPGAIELKAGSATRPFFGVQPALVDNEGHPQEGATEGNLVITDSWPGQARTLFGDHERFEQTYFSTFKNM---------YFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKIAEAAVVGIPHAIKGQAIYAYVTLNHGEEPSPELYAEVRNWVEKEIGPLATPDVLHWTDSLPKTRSGKIMRRILRK----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2P2Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -277495 for 4340 contacts (-63.9/contact) +
2D Compatibility (PS) -54117 + (NN) -25781 + (LL) 4496
1D Compatibility (HY) -24800 + (ID) 8600
Total energy: -386297.0 ( -89.01 by residue)
QMean score : 0.481
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