Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEVKHSRLIILGSGPAGYTAAVYAARANLKPVVITGIQPGGQLTTTTEVDNWPGDVEGLTGPALMTRMQQHAERFDTEIVYDHIHTAELQQRPFTLKGDSGT-YTCDALIIATGASAQYLGMSSEEAFMGKGVSACATCDGFFYRNQVVCVVGGGNTAVEEALYLANIAKEVHLIHRRDKLRSEKILQDKLFDKAENGNVHLHWNTTLDEVLGD---ASGVTGVRLKSTIDGSTSELSLAGVFIAIGHKPNTDLFQGQLEMR-DGYLRIHGGSEGNATQTSIEGVFAAGDVADHVYRQAITSAGAGCMAALDAEKYLDDH |
| 4JNQ Chain:A ((25-334)) | ----RHAPVIVIGSGPAGYTAAIYAARAMLKPVVIAGLQQGGQLMITTDVENYPGYAEPVQGPWMMEQMARQAENVGAQIVHDIITEVETTVRPFRLKGDSGTIYTCDALIIATGAQAKWLGLESEQTFMGGGVSACATCDGFFYRGKDVVVVGGGNTAVEEALYLSHIAKSVTIVHRRDGFRAEKIMQDRLLSRE---NVSVVWNSVIDEILGTEARGATVTGVRLKNIVTGETQERATHGVFIAIGHAPAVSLFEGKLKQKPNGYLW----TAPDSTATDVPGIFAAGDVTDDIYRQAVTAAGMGCMAALEAERWL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JNQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -219896 for 2688 contacts (-81.8/contact) +
2D Compatibility (PS) -32670 + (NN) -10517 + (LL) 124
1D Compatibility (HY) -32800 + (ID) 9100
Total energy: -304859.0 ( -113.41 by residue)
QMean score : 0.574
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