Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQIRADFDSGNIQVIDASDPRRIRLAIRPDLASQHFQWFHFKVEGMAPATEHCFTLVNAGQSAYSHAWSGYQAVASYDGERWFRVPSQYDADGLHFQLEPEESEVRFAYFEPYSRERHARLVERALGIEGVERLAVGTSVQGRDIELLRVRRHPDSHLKLWVIAQQHPGEHMAEWFMEGLIERLQRPDDTEMQRLLEKADLYLVPNMNPDGAFHGNLRTNAAGQDLNRAWLEPSAERSPEVWFVQQEMKRHGVDLFLDIHGDEEIPHVFAAGCEGNPGYTPRLERLEQRFREEL-MARGEFQIRHGYPRSAPGQANLALACNFVGQTYDCLAFTIEMPFKDHDDNPEPGTGWSGARSKRLGQDVLSTLAVLVDELR |
3L2N Chain:A ((21-393)) | -RISANFDGGNIETISLANPDDIQLAIRPDAGGEFYQWFNFRFEATIGKT-YTLNILNAGGASYLKGWEDYQAVASYDRQTWFRLPTEYKDGKLSISVELDCEAIQIAYFTPYSYERHLDLISAVQLHPLVSTEHLGLTLDGRDMTLVKVGDDDPSKKSIWITARQHPGETMAEWLVEGLLNQLLDNDCPTSKALLDKANFYIVPNMNPDGSVRGHLRTNAVGANLNREWQTPSLERSPEVYYVVNKMHETGVDLFYDVHGDEGLPYVFLAGCEGIPNYSDKLASLQQDFVAALSLASADFQTEFGYDKDEPGKANLTVACNWVANTFKCLSNTLEMPFKDNANLADPFQGWSPERSVYFGEASLIAMRAVIDKI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L2N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -193355 for 3364 contacts (-57.5/contact) +
2D Compatibility (PS) -40534 + (NN) -22929 + (LL) 412
1D Compatibility (HY) -34800 + (ID) 8400
Total energy: -299606.0 ( -89.06 by residue)
QMean score : 0.524
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