Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNPLIKTILSTNAGAGLAILRIVTGLTLMSHGSQKLFGMFGGAGLNGMAQWFESIGLTPGYLLATLAGSAEFFGGLALVIGLLVRPASVVVGFTMIVAIFSVHIGNGFFITDNGYEYALTLLMISVALLIDGAGKFSLDGKLSR |
2V1N Chain:A ((58-65)) | MNATQWET---------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V1N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27 for 18 contacts (-1.5/contact) +
2D Compatibility (PS) -748 + (NN) 33 + (LL) 9104
1D Compatibility (HY) 800 + (ID) 100
Total energy: 9062.0 ( 503.44 by residue)
QMean score : -0.416
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