Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTIEERVKKIVAEQLGVKEEEVTNSASFVEDLGADSLDTVELVMALEEEFETEIPDEKAEKITTVQEAIDYIVAHQQ
4IHF Chain:G ((3-78))
MSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGH--
General information:
TITO was launched using:
RESULT:
Template:
4IHF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41569 for 508 contacts (-81.8/contact) +
2D Compatibility (PS) -8162 + (NN) -2424 + (LL) 240
1D Compatibility (HY) -9200 + (ID) 3350
Total energy: -64465.0 ( -126.90 by residue)
QMean score : 0.728
(partial model without unconserved sides chains):
PDB file :
Tito_4IHF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IHF-query.scw
PDB file :
Tito_Scwrl_4IHF.pdb
: