Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEPFRNIGIIGRLGSTQVLDTIRRLKKFLIDRHLHVILEDTIAEVLPGHGLQTCSRKIMGEI------------CDLVVVVGGDGSMLGAARALARHKVPVLGINRGSLGFLTDIRPDELEAKVGEVLDGQYIVESRFLLDAQVRRGIDSMGQGDALNDVVLHPGKSTRMIEFELYIDGQFVCSQKADGLIVATPTGSTAYALSAGGPIMHPKLDAIVIVPMYPHMLSSRPIVVDGNSELKIVVSPNMQIYPQVSCDGQNHFTCAPGDTVTISKKPQKLRLIHPIDHNYYEICRTKLGWGSRLGGGD |
| 1U0R Chain:A ((4-274)) | ---HRSVLLVVHT----ATETARRVEKVLGDNK--IALRVLSAEAV--------------EIEVVDADQHAADGCELVLVLGGDGTFLRAAELARNASIPVLGVNLGRIGFLAEAEAEAIDAVLEHVVAQDYRVEDRLTLDVVVRQGGRIVNRGWALNEVSLEKGPRLGVLGVVVEIDGRPVSAFGCDGVLVSTPTGSTAYAFSAGGPVLWPDLEAILVVPNNAHALFGRPMVTSPEATIAIEIEADGH-DALVFCDGRREMLIPAGSRLEVTR--------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1U0R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -184240 for 1951 contacts (-94.4/contact) +
2D Compatibility (PS) -26545 + (NN) -11872 + (LL) 2076
1D Compatibility (HY) -17200 + (ID) 4400
Total energy: -242181.0 ( -124.13 by residue)
QMean score : 0.492
|
|
|