Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQHRLAAAIALVGLVLSGCDSQTNVELKTPAQKASYGIGLNMGK----SLSQE---GMDDLDSKAVAKGIEDALGKKKQQLTDEELTEAFAFLQKRAEERMAAIGD----ENAKAGKKFLEENGKRDGVTTTASGLQYEIVKKADGPQPKATDVVTVHYEGRLTDGTVFDSSIERGSPIDLPVSGVIPGWVEALQLMHVGEKIKLYIPSELAYGAQSPSPAIPANSVLVFDMELLGIKDPSKPDAEPEAGAAAQPEAKADAKK
1Q6I Chain:A ((16-224))
---------------------------FKNDDQKSAYALGASLGRYMENSLKEQEKLGIK-LDKDQLIAGVQDAFADK-SKLSDQEIEQTLQAFEARVKSSAQAKMEKDAADNEAKGKEYREKFAKEKGVKTSSTGLVYQVVEAGKGEAPKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRLDGVIPGWTEGLKNIKKGGKIKLVIPPELAYG-KAGVPGIPPNSTLVFDVELLDVK-------------------------
General information:
TITO was launched using:
RESULT:
Template:
1Q6I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50128 for 1308 contacts (-38.3/contact) +
2D Compatibility (PS) -21688 + (NN) -14915 + (LL) 3356
1D Compatibility (HY) -14800 + (ID) 4100
Total energy: -102275.0 ( -78.19 by residue)
QMean score : 0.583
(partial model without unconserved sides chains):
PDB file :
Tito_1Q6I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q6I-query.scw
PDB file :
Tito_Scwrl_1Q6I.pdb
: