Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLFADAPLTLPDADLRYLPHWLDAPLASAWLLRLEQETPWEQPIL---RIHGEEHPTPRLVAWYGDPDAAYRYSGQVHRPLPWTALLGEIRERVEREVGQRVNGVLLNYYRDGQDSMGWHSDDEPELRRDPLVASLSLGGSRRFDLRRK---GQT---RIAHS-LELTHGSLLVMRGATQHHWQHQVAKTRRSCMPRLNLTFRLVYPQP
3BTY Chain:A ((30-201))
----------------------------------LEKEVEYFTGALARVQVFGKWHSVPRKQATYGDAGLTYTFSGLTLSPKPWIPVLERIRDHVSGVTGQTFNFVLINRYKDGSDHICEHRDDERELAPGSPIASVSFGASRDFVFRHKDSR---PSRRVAVVRLPLAHGSLLMMNHPTNTHWYHSLPVRKKVLAPRVNLTFRKI----
General information:
TITO was launched using:
RESULT:
Template:
3BTY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42266 for 1116 contacts (-37.9/contact) +
2D Compatibility (PS) -16892 + (NN) -4928 + (LL) 2452
1D Compatibility (HY) -10400 + (ID) 3400
Total energy: -75434.0 ( -67.59 by residue)
QMean score : 0.350
(partial model without unconserved sides chains):
PDB file :
Tito_3BTY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BTY-query.scw
PDB file :
Tito_Scwrl_3BTY.pdb
: