Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQTDKHYFGTLLAQTSRAWRAELDRRLSHLGLSQARWLVLLHLARHRDSPTQRELAQSVGVEGPTLARLLDGLESQGLVRRLAVAEDRRAKHIVLTPKADVLIADIEAIAASVRNDVLTGIDESEQALCQQVLLRILANLENR
3QPT Chain:A ((5-135))
--------LGSDLARLVRIWRALIDHRLKPLELTQTHWVTLHNIHQLPPDQSQIQLAKAIGIEQPSLVRTLDQLEDKGLISRQT-------KRIKLTEKAEPLIAEMEEVIHKTRGEILAGISSEEIEL----LIKLIAKLEH-
General information:
TITO was launched using:
RESULT:
Template:
3QPT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86953 for 743 contacts (-117.0/contact) +
2D Compatibility (PS) -13899 + (NN) -9254 + (LL) 1944
1D Compatibility (HY) -10400 + (ID) 2500
Total energy: -121062.0 ( -162.94 by residue)
QMean score : 0.651
(partial model without unconserved sides chains):
PDB file :
Tito_3QPT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QPT-query.scw
PDB file :
Tito_Scwrl_3QPT.pdb
: