Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKGDKKVIQHLNKILGNELIAINQYFLHSRMWNDWGLKRLGAHEYHESIDEMKHADKLIERILFLEGLPNLQDLGKLLIGENTQEMLQCDLNLELKATKDLREAIVHCEQVHDYVSRDLLKDILESEEEHIDYLETQLGLIQKVGLENYLQSHMHEDD
3ISF Chain:A ((2-156))
-KGDKKVIQHLNKILGNELIAINQYFLHSRMWNDWGLKRLGAHEYHESIDEMKHADKLIERILFLEGLPNLQDLGKLLIGENTQEMLQCDLNLELKATKDLREAIVHCEQVHDYVSRDLLKDILESEEEHIDYLETQLGLIQKVGLENYLQSHMHE--
General information:
TITO was launched using:
RESULT:
Template:
3ISF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42529 for 1175 contacts (-36.2/contact) +
2D Compatibility (PS) -17081 + (NN) -11946 + (LL) 56
1D Compatibility (HY) -23600 + (ID) 7750
Total energy: -102850.0 ( -87.53 by residue)
QMean score : 0.614
(partial model without unconserved sides chains):
PDB file :
Tito_3ISF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ISF-query.scw
PDB file :
Tito_Scwrl_3ISF.pdb
: