Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTSHLIRIALPGALAAALLASQVSQAADLVPPPGYYAAVGERKGSAGSCPAVPPPYTGSLVFTSKYEGSDSARATLNVKAEKTFRSQIKDITDMERGATKLVTQYMRSGRDGDLACALNWMSAWARAGALQSDDFNHTGKSMRKWALGSLSGAYMRLKFSS--SRPLAAHAEQSREIEDWFARLGTQVVRDWSGLP---LKKINNHSYWAAWSVMSTAVVTNRRDLFDWAVSEFKVAANQVDEQGFLPNELKRRQRALAYHNYALPPLAMIAAFAQVNGVDL--RQENHGALQRLAERVMKGVDDEETFEEKTGEDQDMTDLKVDNKYAWLEPYCALYRCEPKMLEAKKDREPFNSFRLGGEVTRVFSREGGS |
| 1HV6 Chain:A ((50-306)) | ---------------------------------------------------ATPNPQQGEMVIPRRYLSGNHGPVNPDYEPVVTL------YRDFEKISATLGNLYVATGKPVYATCLLNMLDKWAKADAL----LNYDPKS-QSWYQVEWSAATAAFALSTMMAEPNVDTAQRERVVK-WLNR----VARHQTSFPGGDTSCCNNHSYWRGQEATIIGVISKDDELFRWGLGRYVQAMGLINEDGSFVHEMTRHEQSLHYQNYAMLPLTMIAETASRQGIDLYAYKENGRDIHSARKFVFAAVKNPDLIKKYASEPQDTRAFK-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HV6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67160 for 1955 contacts (-34.4/contact) +
2D Compatibility (PS) -27276 + (NN) -18522 + (LL) 6484
1D Compatibility (HY) -13600 + (ID) 3600
Total energy: -123674.0 ( -63.26 by residue)
QMean score : 0.488
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