Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNILVRPSQTPKGQCWQVCLDQQAVNFRSESEARRFVDRLEARLRAPHVLPELKQRTA
1DDW Chain:A ((84-110))
--------------------TVYGLGFSSEHHLSKFAEKFQEFKEAA-----------
General information:
TITO was launched using:
RESULT:
Template:
1DDW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2071 for 99 contacts (-20.9/contact) +
2D Compatibility (PS) -3134 + (NN) -1980 + (LL) 2464
1D Compatibility (HY) -800 + (ID) 250
Total energy: -5771.0 ( -58.29 by residue)
QMean score : 0.650
(partial model without unconserved sides chains):
PDB file :
Tito_1DDW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DDW-query.scw
PDB file :
Tito_Scwrl_1DDW.pdb
: