Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRFMALALCFVLPTAAHAASLKDFELSKMLEKVAKESSVGTPRAINEDILDQGYTVEGNQLINHLSVRASHAERMRSNPDSVRSQLGDSVCSNTGYRQLLARGAILTYSFTEYKTNQPVATERFDAGSCRIQGKK |
4MDP Chain:A ((297-334)) | -------------------------------------------------------------------------------PDSMRKQLGDRLPEFTPEEVALVKGSNDFYGMNHYTAN------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MDP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 535 for 128 contacts (4.2/contact) +
2D Compatibility (PS) -4113 + (NN) -1076 + (LL) 7320
1D Compatibility (HY) -800 + (ID) 700
Total energy: 1166.0 ( 9.11 by residue)
QMean score : 0.356
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