Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPRTLAFVSTLLLAAFCALPAQADSFIMRLLNKPVPGGVAVVDLGEEGPPPRAFYQGKPVLVVREEGRRWIAVVGIPLSTKPGPQKLEVRAATGNHEERFSVGSKHYREQRITLKNKRQVNPLPEDLKRIERELAEQTAAYRRFSPGLPSNLMLDKPVDGP-LSSPFGLRRFF-NGEERNPHSGLDFAVPAGTPIKAPAAGKVILIGDYFFNGKTVFVDHGQGFISMFCHLSKID--VKLGQQVPRGGVLGKVGATGRATGPHMHWNVSLNDARVDPAIFIGAFQP |
| 4RNY Chain:A ((189-317)) | -------------------------------------------------------------------------------------------------------------------------------------------------------FLLETPVKYTRISSPFSYGRFHPVLKVRRPHYGVDYAAKHGSLIHSASDGRVGFMGVKAGYGKVVEI-HLNELRLVYAHMSAFANGLKKGSFVKKGQIIGRVG----STGPHLHFGVYKNSRPINPLGYI----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RNY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75609 for 904 contacts (-83.6/contact) +
2D Compatibility (PS) -12986 + (NN) -4645 + (LL) 9740
1D Compatibility (HY) -8000 + (ID) 2100
Total energy: -93600.0 ( -103.54 by residue)
QMean score : 0.539
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