Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTRKLGNSGLEIPALVFGGNV-FGWTADESTSFRLLDALLDAGLNCIDTADVYSRWVPGHQGGESETLIGKWLKRTG-KRDRMVIASKV-GMDMGNGHKGLSAAYIEQALERSLRRLQTDYLDLYQSHTDDPHTDLEETLSTYGELIKKGKVRVIGASNYDARRLLEARQVSARLNLPSYQSLQPEYNLYDRADYETNLEPTVEELGIGVISYYSLASGFLSGKYRNQADTAGRARGEKVKGY-------LNERG---VAILAALDEVAEQYNANPTQVALAWLIARPTVTAPIASATSLEQLDDLIAATHL--KLDEQAIHRLDSASAY |
| 3EB3 Chain:A ((6-319)) | ---RNLGKSGLRVSCLGLGTWVTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYA-------AGKAEVVLGNIIKKKGWRRSSLVITTKIFAGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSGIPPYSRA---SLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQLMENIGAIQVLPKLSSSIVHEIDS---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EB3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145063 for 2545 contacts (-57.0/contact) +
2D Compatibility (PS) -33146 + (NN) -21427 + (LL) 996
1D Compatibility (HY) -25200 + (ID) 5000
Total energy: -228840.0 ( -89.92 by residue)
QMean score : 0.564
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