Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKAYDIEIVNDAAHAGEANHGWCFGLPPGIRPEQWPLDPDTGYPLMHGFTLLLPEDYRVH-GPEIVALSFFSLAPDQNDGGPTSVDGIREMLIDPPAQPPAEAELRPFWEAGRNSHPRLHRMEDILGGAYALILLDAAEFSGAPCQPRALPAGNPLLAQTEPPQWLEAGSAASFVPDWAEDDYYLLRALGGRPAAGHQQRYPLRWTARAQDPNAGVVPSEYGDGGYQLPHYWLDGKIERDNYREHPWVEGHLPNHIGGTMRPVQGVPEMSPFYVEFEEYLGGYNFGGGNAQLDFRDMRFDWACG |
1PV5 Chain:A ((32-91)) | ---------------TGRYDSKIAGDPYFPKHETYPTDEN-GQPMKLLAQINFSHIPQLDGYPSSGILQFYISVHD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PV5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14778 for 296 contacts (-49.9/contact) +
2D Compatibility (PS) -6423 + (NN) -8537 + (LL) 10940
1D Compatibility (HY) 2400 + (ID) 400
Total energy: -16798.0 ( -56.75 by residue)
QMean score : 0.215
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