Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNGVSRLLSLALLGAALHWAPAQAEEQPRLFELLGQPGYKATWHAMFKGESDVPKWVSDASGPSSPSTSLSLEGQPYVLANSCKPHDCGNNRLLVAFRGDKSAAYGLQVSLPDEPAEVMQTPSKYATYRWYGEPSRQVRELLMKQLESDPNWK
1XS0 Chain:A ((16-91))
---------------------------------------KAAFNQMVQGHK-LPAWVMKG-GTYTPAQTVTLGDETYQVMSACKPHDCGSQRIAVMWSEKSNQMTGLFSTIDEKTSQ------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1XS0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13480 for 444 contacts (-30.4/contact) +
2D Compatibility (PS) -8415 + (NN) -7532 + (LL) 5292
1D Compatibility (HY) -5200 + (ID) 1100
Total energy: -30435.0 ( -68.55 by residue)
QMean score : 0.379
(partial model without unconserved sides chains):
PDB file :
Tito_1XS0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XS0-query.scw
PDB file :
Tito_Scwrl_1XS0.pdb
: