Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIAAYQARCQARVDAALDALFVAPREELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEVLAD--TRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVMHRHKTGALIEASVRLGALASGRAEPASLAALERYAEAIGLAFQVQDDILDVESDTATLGKTQGKDQAHNKPTYPALLGLEAAKGYALELRDLALAALDGFPPSADPLRQLARYIVERRN
3TS7 Chain:A ((9-302))
-LSDFMRSSQERVERALDARLPAADRMPERLHQAMRYSVLGGGKRMRPLLTYATGQTIGVAADLLDGPACAVEFIHVYSLIHDDLPAMDDDDLRRGKPTCHKAYDEATAILAGDGLQALAFHVLAQDPSIAVPAENRIA--MIETLAKASGPAGMVGGQAIDLASVGKKLDLPGLENMHIRKTGALIRASVRLACLARPGLPAEQFDRLDHYAKCIGLAFQIQDDILDEESD---------------KPNYPALLGLSGAKEKAEEMHEAALESLAGFGPEADLLRELARFIIQRQS
General information:
TITO was launched using:
RESULT:
Template:
3TS7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -138186 for 2316 contacts (-59.7/contact) +
2D Compatibility (PS) -31494 + (NN) -32512 + (LL) 1020
1D Compatibility (HY) -23600 + (ID) 8150
Total energy: -232922.0 ( -100.57 by residue)
QMean score : 0.522
(partial model without unconserved sides chains):
PDB file :
Tito_3TS7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TS7-query.scw
PDB file :
Tito_Scwrl_3TS7.pdb
: