Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQGHPEVIDYLNTLLTGELAARDQYFIHSRMYEDWGFSKLYERLNHEMEEETQHADALLRRILLLEGTPRMRPDDIHPGTTVPEMLEADLKLERHVRAALAKGIALCEQHKDFVSRDILKAQLADTEEDHAYWLEQQLGLIARMGLENYLQSQI
3R2M Chain:A ((1-154))
MQGHPEVIDYLNTLLTGELAARDQYFIHSRMYEDWGFSKLYERLNHEMEEETQHADALLRRILLLEGTPRMRPDDIHPGTTVPEMLEADLKLERHVRAALAKGIALCEQHKDFVSRDILKAQLADTEEDHAYWLEQQLGLIARMGLENYLQSQI
General information:
TITO was launched using:
RESULT:
Template:
3R2M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44182 for 1202 contacts (-36.8/contact) +
2D Compatibility (PS) -17174 + (NN) -10895 + (LL) 0
1D Compatibility (HY) -21200 + (ID) 7700
Total energy: -101151.0 ( -84.15 by residue)
QMean score : 0.648
(partial model without unconserved sides chains):
PDB file :
Tito_3R2M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R2M-query.scw
PDB file :
Tito_Scwrl_3R2M.pdb
: