Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSALQPSRSYRITGYSPAISNGYRQRLFSMGLLPGAALRVVRIAPLGDPIQVETRQTSLALRRKDLALLTLVPLD
2K5F Chain:A ((3-71))
LSELKAGDRAEVT--SVAAEPAVRRRLMDLGLVRGAKLKVLRFAPLGDPIEVNCNGMLLTMRRNEAEGITV----
General information:
TITO was launched using:
RESULT:
Template:
2K5F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54316 for 492 contacts (-110.4/contact) +
2D Compatibility (PS) -6934 + (NN) -835 + (LL) 72
1D Compatibility (HY) -6400 + (ID) 1350
Total energy: -69763.0 ( -141.79 by residue)
QMean score : 0.359
(partial model without unconserved sides chains):
PDB file :
Tito_2K5F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K5F-query.scw
PDB file :
Tito_Scwrl_2K5F.pdb
: